STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO16107.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
ALO16977.1
Hypothetical protein.
  
     0.694
ALO16142.1
Hypothetical protein.
  
     0.667
ALO15841.1
MarR family protein.
  
    0.577
ALO14987.1
Putative membrane protein.
  
     0.576
dnaE_2
DNA polymerase III subunit alpha.
       0.492
ALO17485.1
Hypothetical protein.
  
     0.456
ALO16091.1
Copper/silver efflux system membrane fusion protein CusB.
  
   
 0.453
ALO15895.1
Efflux transporter, RND family, MFP subunit.
  
   
 0.450
ALO17318.1
HflC protein.
  
     0.427
ALO15832.1
Hypothetical protein.
  
     0.413
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.