STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO16119.1Hypothetical protein. (263 aa)    
Predicted Functional Partners:
ALO15446.1
Cell surface protein SprA.
  
    0.766
ALO13712.1
DoxX.
  
   
 0.757
ALO17338.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.751
ALO15556.1
Tol-pal system protein YbgF.
  
   0.744
ALO15868.1
Gliding motility-associated lipoprotein GldJ.
  
     0.744
ALO16651.1
Hypothetical protein.
  
     0.742
ALO15952.1
Gliding motility-associated lipoprotein GldB.
  
     0.732
ALO16857.1
Gliding motility-associated lipoprotein GldD.
  
     0.728
ALO17160.1
Hypothetical protein.
  
     0.723
ALO16713.1
Hypothetical protein.
  
     0.716
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.