STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
echA8_1Putative enoyl-CoA hydratase echA8. (259 aa)    
Predicted Functional Partners:
mmgB_2
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.971
pcaF
Beta-ketoadipyl-CoA thiolase.
 
 0.869
thlA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.855
evgS_2
Sensor protein EvgS precursor.
   
 
 0.849
mmgB_1
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.821
arsC_2
Arsenate reductase; Belongs to the ArsC family.
       0.777
ALO16135.1
Cysteine-rich secretory protein family protein.
       0.773
ALO16132.1
Hypothetical protein.
       0.762
mmgC_1
Acyl-CoA dehydrogenase.
 
 0.726
arcB_9
Aerobic respiration control sensor protein ArcB.
   
 
 0.715
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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