STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO16146.1Nucleoside triphosphate pyrophosphohydrolase. (205 aa)    
Predicted Functional Partners:
ALO16300.1
Acyl-CoA reductase (LuxC).
  
    0.748
ALO14014.1
Acyl-protein synthetase, LuxE.
  
     0.722
ALO14348.1
ATP-dependent Clp protease adaptor; Belongs to the ClpS family.
 
     0.682
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.585
ALO16148.1
Polyketide cyclase / dehydrase and lipid transport.
       0.564
zraS_4
Sensor protein ZraS.
  
     0.521
ALO17473.1
Hypothetical protein.
  
     0.494
ALO16297.1
Nucleoside triphosphate pyrophosphohydrolase.
 
  
 0.490
ALO16749.1
OsmC-like protein.
  
     0.463
yddE
Putative isomerase YddE.
       0.445
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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