STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcaFBeta-ketoadipyl-CoA thiolase. (416 aa)    
Predicted Functional Partners:
mmgB_1
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.998
mmgB_2
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.987
echA8_2
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.959
gltA2
Citrate synthase 1; Belongs to the citrate synthase family.
  
 0.946
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.936
ALO14957.1
Acetyl coenzyme A synthetase (ADP forming), alpha domain.
 
 
 0.928
accA1_2
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.923
korA_2
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.923
thlA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.913
pta_1
Phosphate acetyltransferase.
    
 0.909
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.