Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALO14964.1 | kamA | L21SP5_01310 | L21SP5_02659 | Hypothetical protein; Alanine dehydrogenase/PNT, N-terminal domain. | L-lysine 2,3-aminomutase. | 0.901 |
ALO14964.1 | lysA | L21SP5_01310 | L21SP5_01233 | Hypothetical protein; Alanine dehydrogenase/PNT, N-terminal domain. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.907 |
ALO15401.1 | cheR_1 | L21SP5_01759 | L21SP5_00657 | CheR methyltransferase, SAM binding domain. | Chemotaxis protein methyltransferase. | 0.756 |
ALO15401.1 | cheR_2 | L21SP5_01759 | L21SP5_01758 | CheR methyltransferase, SAM binding domain. | Chemotaxis protein methyltransferase. | 0.834 |
ALO15401.1 | kamA | L21SP5_01759 | L21SP5_02659 | CheR methyltransferase, SAM binding domain. | L-lysine 2,3-aminomutase. | 0.518 |
ALO15401.1 | nifJ | L21SP5_01759 | L21SP5_03073 | CheR methyltransferase, SAM binding domain. | Pyruvate-flavodoxin oxidoreductase. | 0.885 |
ALO15740.1 | bkdA2 | L21SP5_02103 | L21SP5_00503 | Transglutaminase-like superfamily protein. | 2-oxoisovalerate dehydrogenase subunit beta. | 0.520 |
ALO15740.1 | kamA | L21SP5_02103 | L21SP5_02659 | Transglutaminase-like superfamily protein. | L-lysine 2,3-aminomutase. | 0.748 |
ALO16993.1 | kamA | L21SP5_03380 | L21SP5_02659 | Multidrug resistance protein. | L-lysine 2,3-aminomutase. | 0.506 |
bkdA2 | ALO15740.1 | L21SP5_00503 | L21SP5_02103 | 2-oxoisovalerate dehydrogenase subunit beta. | Transglutaminase-like superfamily protein. | 0.520 |
bkdA2 | kamA | L21SP5_00503 | L21SP5_02659 | 2-oxoisovalerate dehydrogenase subunit beta. | L-lysine 2,3-aminomutase. | 0.503 |
bkdA2 | nifJ | L21SP5_00503 | L21SP5_03073 | 2-oxoisovalerate dehydrogenase subunit beta. | Pyruvate-flavodoxin oxidoreductase. | 0.744 |
cheR_1 | ALO15401.1 | L21SP5_00657 | L21SP5_01759 | Chemotaxis protein methyltransferase. | CheR methyltransferase, SAM binding domain. | 0.756 |
cheR_1 | cheR_2 | L21SP5_00657 | L21SP5_01758 | Chemotaxis protein methyltransferase. | Chemotaxis protein methyltransferase. | 0.736 |
cheR_1 | cheR_3 | L21SP5_00657 | L21SP5_03116 | Chemotaxis protein methyltransferase. | Chemotaxis protein methyltransferase. | 0.738 |
cheR_1 | kamA | L21SP5_00657 | L21SP5_02659 | Chemotaxis protein methyltransferase. | L-lysine 2,3-aminomutase. | 0.528 |
cheR_1 | nifJ | L21SP5_00657 | L21SP5_03073 | Chemotaxis protein methyltransferase. | Pyruvate-flavodoxin oxidoreductase. | 0.911 |
cheR_2 | ALO15401.1 | L21SP5_01758 | L21SP5_01759 | Chemotaxis protein methyltransferase. | CheR methyltransferase, SAM binding domain. | 0.834 |
cheR_2 | cheR_1 | L21SP5_01758 | L21SP5_00657 | Chemotaxis protein methyltransferase. | Chemotaxis protein methyltransferase. | 0.736 |
cheR_2 | kamA | L21SP5_01758 | L21SP5_02659 | Chemotaxis protein methyltransferase. | L-lysine 2,3-aminomutase. | 0.518 |
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