Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALO16306.1 | ALO16307.1 | L21SP5_02683 | L21SP5_02684 | Putative acetyltransferase. | Outer membrane assembly lipoprotein YfiO. | 0.773 |
| ALO16306.1 | ALO16310.1 | L21SP5_02683 | L21SP5_02687 | Putative acetyltransferase. | Hypothetical protein. | 0.465 |
| ALO16306.1 | ALO16812.1 | L21SP5_02683 | L21SP5_03197 | Putative acetyltransferase. | Hypothetical protein. | 0.541 |
| ALO16306.1 | def_2 | L21SP5_02683 | L21SP5_02685 | Putative acetyltransferase. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.779 |
| ALO16306.1 | yrrK | L21SP5_02683 | L21SP5_02686 | Putative acetyltransferase. | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.774 |
| ALO16307.1 | ALO16306.1 | L21SP5_02684 | L21SP5_02683 | Outer membrane assembly lipoprotein YfiO. | Putative acetyltransferase. | 0.773 |
| ALO16307.1 | ALO16310.1 | L21SP5_02684 | L21SP5_02687 | Outer membrane assembly lipoprotein YfiO. | Hypothetical protein. | 0.532 |
| ALO16307.1 | def_2 | L21SP5_02684 | L21SP5_02685 | Outer membrane assembly lipoprotein YfiO. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.778 |
| ALO16307.1 | yrrK | L21SP5_02684 | L21SP5_02686 | Outer membrane assembly lipoprotein YfiO. | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.779 |
| ALO16310.1 | ALO16306.1 | L21SP5_02687 | L21SP5_02683 | Hypothetical protein. | Putative acetyltransferase. | 0.465 |
| ALO16310.1 | ALO16307.1 | L21SP5_02687 | L21SP5_02684 | Hypothetical protein. | Outer membrane assembly lipoprotein YfiO. | 0.532 |
| ALO16310.1 | def_2 | L21SP5_02687 | L21SP5_02685 | Hypothetical protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.465 |
| ALO16310.1 | yrrK | L21SP5_02687 | L21SP5_02686 | Hypothetical protein. | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.465 |
| ALO16812.1 | ALO16306.1 | L21SP5_03197 | L21SP5_02683 | Hypothetical protein. | Putative acetyltransferase. | 0.541 |
| def_2 | ALO16306.1 | L21SP5_02685 | L21SP5_02683 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Putative acetyltransferase. | 0.779 |
| def_2 | ALO16307.1 | L21SP5_02685 | L21SP5_02684 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Outer membrane assembly lipoprotein YfiO. | 0.778 |
| def_2 | ALO16310.1 | L21SP5_02685 | L21SP5_02687 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Hypothetical protein. | 0.465 |
| def_2 | yrrK | L21SP5_02685 | L21SP5_02686 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.800 |
| yrrK | ALO16306.1 | L21SP5_02686 | L21SP5_02683 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Putative acetyltransferase. | 0.774 |
| yrrK | ALO16307.1 | L21SP5_02686 | L21SP5_02684 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Outer membrane assembly lipoprotein YfiO. | 0.779 |
page 1 of 2