STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpF_3Sodium-cholate efflux protein MrpF. (86 aa)    
Predicted Functional Partners:
mnhE1_3
Mrp complex subunit E1.
 
 
 0.986
hyfB
Hydrogenase-4 component B.
 
 
 0.985
mnhG1
Mrp complex subunit G1.
 
 
 0.983
mrpC_2
Multiple resistance and pH homeostasis protein C.
 
 
 0.980
mrpB_3
Multiple resistance and pH homeostasis protein B.
 
 
 0.973
ALO16326.1
Putative monovalent cation/H+ antiporter subunit B.
 
 
   0.950
mnhE1_1
Mrp complex subunit E1.
 
 
 0.936
mrpA_3
Multiple resistance and pH homeostasis protein A.
  
 
 0.933
mrpG_1
Multiple resistance and pH homeostasis protein G.
 
 
 0.924
hyfC
Hydrogenase-4 component C.
 
 
   0.910
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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