Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroC | aroF_1 | L21SP5_02743 | L21SP5_01789 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.993 |
| aroC | aroF_2 | L21SP5_02743 | L21SP5_02744 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.997 |
| aroC | pabA | L21SP5_02743 | L21SP5_02733 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para-aminobenzoate synthase glutamine amidotransferase component II. | 0.952 |
| aroC | trpA | L21SP5_02743 | L21SP5_02738 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.736 |
| aroC | trpB | L21SP5_02743 | L21SP5_02737 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.586 |
| aroC | trpC | L21SP5_02743 | L21SP5_02735 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol phosphate synthase. | 0.424 |
| aroC | trpD2 | L21SP5_02743 | L21SP5_02734 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate phosphoribosyltransferase 2; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.583 |
| aroC | trpE | L21SP5_02743 | L21SP5_02732 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component 1. | 0.954 |
| aroC | trpG | L21SP5_02743 | L21SP5_00381 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component II. | 0.915 |
| aroF_1 | aroC | L21SP5_01789 | L21SP5_02743 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.993 |
| aroF_1 | aroF_2 | L21SP5_01789 | L21SP5_02744 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.975 |
| aroF_1 | pabA | L21SP5_01789 | L21SP5_02733 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Para-aminobenzoate synthase glutamine amidotransferase component II. | 0.937 |
| aroF_1 | trpA | L21SP5_01789 | L21SP5_02738 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.415 |
| aroF_1 | trpC | L21SP5_01789 | L21SP5_02735 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Indole-3-glycerol phosphate synthase. | 0.467 |
| aroF_1 | trpD2 | L21SP5_01789 | L21SP5_02734 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Anthranilate phosphoribosyltransferase 2; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.463 |
| aroF_1 | trpE | L21SP5_01789 | L21SP5_02732 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Anthranilate synthase component 1. | 0.937 |
| aroF_1 | trpG | L21SP5_01789 | L21SP5_00381 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Anthranilate synthase component II. | 0.889 |
| aroF_2 | aroC | L21SP5_02744 | L21SP5_02743 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.997 |
| aroF_2 | aroF_1 | L21SP5_02744 | L21SP5_01789 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.975 |
| aroF_2 | pabA | L21SP5_02744 | L21SP5_02733 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Para-aminobenzoate synthase glutamine amidotransferase component II. | 0.937 |
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