STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO16493.1Putative O-linked N-acetylglucosamine transferase, SPINDLY family. (269 aa)    
Predicted Functional Partners:
ALO16492.1
Cobaltochelatase subunit.
     0.994
ALO16491.1
VWFA-related Acidobacterial domain protein.
     0.974
ALO16490.1
Hypothetical protein.
 
     0.940
ALO16494.1
Hypothetical protein.
 
   0.932
ALO16489.1
Putative conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
    0.923
ALO16495.1
Putative O-linked N-acetylglucosamine transferase, SPINDLY family.
 
     0.922
ALO16488.1
Magnesium chelatase ATPase subunit D.
 
     0.660
ALO16166.1
Putative protein containing caspase domain protein.
  
 0.561
htpG
High temperature protein G.
   
 0.554
dnaK
Heat shock protein 70; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.533
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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