STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO16719.1Outer membrane cobalamin receptor protein. (815 aa)    
Predicted Functional Partners:
ALO14817.1
Hypothetical protein; TonB family C-terminal domain.
 
   0.715
ALO15285.1
TonB-linked outer membrane protein, SusC/RagA family.
  
    0.707
ALO17338.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.688
ALO16119.1
Hypothetical protein.
 
     0.663
ALO14538.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.645
ALO15284.1
Susd and RagB outer membrane lipoprotein.
  
     0.642
ALO14881.1
Hypothetical protein.
  
     0.622
ALO14992.1
Outer membrane cobalamin receptor protein.
  
     0.598
ALO13712.1
DoxX.
  
     0.597
ALO14539.1
SusD family protein.
  
     0.577
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.