STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kgp_2Lys-gingipain W83 precursor. (1625 aa)    
Predicted Functional Partners:
scpD
Zinc carboxypeptidase precursor.
  
     0.725
ALO15919.1
Translocation protein TolB.
  
     0.704
ALO15004.1
Flagellar basal body rod modification protein.
 
     0.678
ALO15981.1
Phosphodiesterase.
  
     0.642
ALO16772.1
Hypothetical protein.
  
    0.636
ALO15980.1
Hypothetical protein.
  
     0.604
ALO17081.1
Putative membrane protein.
  
     0.597
ALO16614.1
Hypothetical protein; Por secretion system C-terminal sorting domain.
  
     0.588
bsn_5
Extracellular ribonuclease precursor.
  
     0.586
ALO15391.1
Polysaccharide export protein, MPA1 family.
 
     0.572
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.