STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO17276.1Type I secretion outer membrane protein, TolC family. (409 aa)    
Predicted Functional Partners:
cusA
Cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.974
cusB
Cation efflux system protein CusB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.914
ALO15489.1
Universal stress protein family protein.
  
     0.613
ALO14711.1
Hypothetical protein.
  
     0.587
ALO17279.1
Hypothetical protein.
 
     0.489
ALO17278.1
Mercuric transport protein periplasmic component.
  
  
 0.483
copB
Copper-exporting P-type ATPase B.
 
  
 0.476
macA_1
Macrolide-specific efflux protein MacA precursor.
 
   0.459
hlyD_1
Hemolysin secretion protein D, chromosomal.
  
 
 0.451
mdtN
Multidrug resistance protein MdtN.
  
 
 0.451
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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