STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheW_2Chemotaxis protein CheW. (163 aa)    
Predicted Functional Partners:
cheA_2
Chemotaxis protein CheA.
 
 0.998
tsr
Serine chemoreceptor protein.
 
 0.996
cheR_1
Chemotaxis protein methyltransferase.
  
 0.994
cheA_1
Chemotaxis protein CheA.
 
 0.992
trg_1
Ribose and galactose chemoreceptor protein.
 
 0.982
trg_2
Ribose and galactose chemoreceptor protein.
 
 0.982
trg_4
Ribose and galactose chemoreceptor protein.
 
 0.982
mcp4
Methyl-accepting chemotaxis protein 4.
 
 0.982
trg_5
Ribose and galactose chemoreceptor protein.
 
 0.982
cheB_2
Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.968
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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