STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT85766.1Phage portal protein, SPP1 Gp6-like. (470 aa)    
Predicted Functional Partners:
SDT85769.1
Hypothetical protein.
 
     0.946
SDT85776.1
Bifunctional DNA primase/polymerase, N-terminal; Manually curated.
 
     0.866
SDT85763.1
Hypothetical protein.
       0.800
SDT85772.1
Hypothetical protein.
       0.773
SDT85760.1
Hypothetical protein.
       0.741
SDT85752.1
Phage major capsid protein, HK97 family.
       0.551
SDT85756.1
Hypothetical protein.
       0.521
SDT85745.1
Phage protein Gp19/Gp15/Gp42.
       0.494
Your Current Organism:
Schaalia radingae
NCBI taxonomy Id: 131110
Other names: ATCC 51856, Actinomyces radingae, BCCM/LMG:15960, CCUG 32394, CCUG 34270, CDC coryneform group E, CIP 105358, DSM 9169, LMG 15960, LMG:15960, S. radingae, strain APL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.