STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT91063.1D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (401 aa)    
Predicted Functional Partners:
SDU02994.1
Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
 
 0.996
SDT86084.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.937
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
 0.937
SDT86513.1
FAD/FMN-containing dehydrogenase.
 
 
 0.927
SDT93291.1
Phosphoglycolate phosphatase.
    
 0.880
SDU06500.1
2-oxoisovalerate dehydrogenase E1 component.
   
 0.870
SDT91782.1
Probable phosphoglycerate mutase.
  
 
  0.869
SDT86261.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
    
  0.866
SDT91078.1
DNA helicase IV.
       0.769
SDT93052.1
Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
  
 
  0.762
Your Current Organism:
Schaalia radingae
NCBI taxonomy Id: 131110
Other names: ATCC 51856, Actinomyces radingae, BCCM/LMG:15960, CCUG 32394, CCUG 34270, CDC coryneform group E, CIP 105358, DSM 9169, LMG 15960, LMG:15960, S. radingae, strain APL1
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