STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU09734.1Putative transcriptional regulator. (69 aa)    
Predicted Functional Partners:
SDU09749.1
Hypothetical protein.
       0.780
SDT85844.1
Prophage antirepressor.
  
    0.626
SDT88932.1
Molybdate transport system permease protein.
       0.602
SDT88893.1
Molybdenum cofactor synthesis domain-containing protein.
    
  0.505
SDT90040.1
PemK-like, MazF-like toxin of type II toxin-antitoxin system.
    
 0.473
SDU09717.1
Hypothetical protein.
       0.418
Your Current Organism:
Schaalia radingae
NCBI taxonomy Id: 131110
Other names: ATCC 51856, Actinomyces radingae, BCCM/LMG:15960, CCUG 32394, CCUG 34270, CDC coryneform group E, CIP 105358, DSM 9169, LMG 15960, LMG:15960, S. radingae, strain APL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.