STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU77695.1LysM domain-containing protein. (201 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.924
SDU77697.1
Hypothetical protein.
       0.798
SDU77692.1
Hypothetical protein.
       0.616
SDU81371.1
Soluble lytic murein transglycosylase.
    
 0.616
SDU77505.1
NAD+ diphosphatase.
   
 
  0.557
SDU79702.1
Thymidine phosphorylase.
   
 
  0.556
SDU79699.1
Cytidine deaminase.
   
 
  0.550
SDU79905.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.542
SDU78717.1
Cna protein B-type domain-containing protein.
   
   0.528
SDU79068.1
LPXTG-motif cell wall anchor domain-containing protein.
   
   0.528
Your Current Organism:
Arcanobacterium phocae
NCBI taxonomy Id: 131112
Other names: A. phocae, CIP 105740, DSM 10002, LMG 18722, LMG:18722, strain M1590/94/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.