STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU78255.1Methylmalonate-semialdehyde dehydrogenase [acylating]. (497 aa)    
Predicted Functional Partners:
SDU79191.1
PTS system IIA component, Glc family /PTS system IIB component, Glc family /PTS system IIC component, Glc family.
   
 
 0.962
SDU79493.1
Succinate dehydrogenase subunit A.
  
 0.955
SDU79497.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
   
 
 0.935
SDU82722.1
Glycine radical.
  
 
 0.927
SDU82729.1
Formate C-acetyltransferase.
  
 
 0.927
SDU79258.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.926
SDU77630.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.924
SDU79492.1
Succinate dehydrogenase / fumarate reductase cytochrome b subunit.
   
 
  0.921
SDU78281.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
 0.913
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
 0.913
Your Current Organism:
Arcanobacterium phocae
NCBI taxonomy Id: 131112
Other names: A. phocae, CIP 105740, DSM 10002, LMG 18722, LMG:18722, strain M1590/94/3
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