STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU78421.1DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. (440 aa)    
Predicted Functional Partners:
SDU78427.1
Thioredoxin reductase (NADPH).
  
    0.832
SDU77630.1
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.818
SDU78424.1
Thioredoxin.
       0.773
SDU79337.1
Aspartate/methionine/tyrosine aminotransferase.
 
 0.740
SDU78593.1
Pimeloyl-ACP methyl ester carboxylesterase.
   
 
 0.719
SDU80609.1
Acetyl esterase/lipase.
   
 
 0.719
SDU78429.1
Hypothetical protein.
  
    0.682
SDU78435.1
NUDIX domain-containing protein; Belongs to the Nudix hydrolase family.
       0.634
trpB
Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
 
 0.616
SDU82662.1
Glutathione synthetase, ATP-grasp domain.
  
  
  0.599
Your Current Organism:
Arcanobacterium phocae
NCBI taxonomy Id: 131112
Other names: A. phocae, CIP 105740, DSM 10002, LMG 18722, LMG:18722, strain M1590/94/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.