STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU79031.1ABC-2 type transport system permease protein. (408 aa)    
Predicted Functional Partners:
SDU79034.1
ABC-2 type transport system ATP-binding protein.
  
 0.977
SDU79036.1
DNA-binding transcriptional regulator, AcrR family.
       0.590
SDU79134.1
CAAX protease self-immunity.
  
 
  0.588
SDU79077.1
ABC-2 type transport system ATP-binding protein.
 
 0.536
SDU80821.1
Hypothetical protein.
  
     0.502
SDU79073.1
ABC-2 family transporter protein.
 
 
 0.413
Your Current Organism:
Arcanobacterium phocae
NCBI taxonomy Id: 131112
Other names: A. phocae, CIP 105740, DSM 10002, LMG 18722, LMG:18722, strain M1590/94/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.