STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU79957.1Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (270 aa)    
Predicted Functional Partners:
SDU79960.1
Cystine transport system permease protein.
 0.999
SDU78116.1
Polar amino acid transport system permease protein.
 0.995
SDU79964.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.993
SDU78118.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.964
SDU78113.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
  
     0.748
SDU79954.1
Dinitrogenase iron-molybdenum cofactor.
       0.485
Your Current Organism:
Arcanobacterium phocae
NCBI taxonomy Id: 131112
Other names: A. phocae, CIP 105740, DSM 10002, LMG 18722, LMG:18722, strain M1590/94/3
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