STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU80062.1Nitroreductase. (229 aa)    
Predicted Functional Partners:
SDU79220.1
fatty-acyl-CoA synthase.
 
 
   0.754
SDU77753.1
O-succinylbenzoic acid--CoA ligase.
 
 
   0.752
SDU81756.1
Long-chain acyl-CoA synthetase.
 
 
   0.729
SDU81972.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
 0.665
SDU81487.1
FMN reductase.
     
 0.652
SDU80059.1
Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling).
       0.563
SDU81866.1
YcaO-like family protein.
  
  
 0.563
SDU78983.1
ABC-2 type transport system permease protein.
  
    0.557
SDU80609.1
Acetyl esterase/lipase.
 
 
  0.498
SDU78756.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
 
  0.439
Your Current Organism:
Arcanobacterium phocae
NCBI taxonomy Id: 131112
Other names: A. phocae, CIP 105740, DSM 10002, LMG 18722, LMG:18722, strain M1590/94/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.