STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU80801.1Iron complex transport system ATP-binding protein. (261 aa)    
Predicted Functional Partners:
SDU80797.1
Glycogen synthase (ADP-glucose).
 
     0.771
SDU80803.1
Membrane protein implicated in regulation of membrane protease activity.
       0.684
SDU78146.1
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
      0.670
SDU80807.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
       0.634
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
       0.580
SDU80810.1
tRNA G18 (ribose-2'-O)-methylase SpoU.
       0.548
SDU78864.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
  0.541
SDU77457.1
Putative ABC transport system ATP-binding protein.
  
     0.486
nucS
Hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
 
     0.480
SDU81030.1
MerR HTH family regulatory protein.
  
     0.480
Your Current Organism:
Arcanobacterium phocae
NCBI taxonomy Id: 131112
Other names: A. phocae, CIP 105740, DSM 10002, LMG 18722, LMG:18722, strain M1590/94/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.