STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU80842.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
SDU77631.1
Lysophospholipase L1.
  
     0.758
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.648
SDU77892.1
Hypothetical protein.
  
     0.570
SDU81732.1
Protein of unknown function.
  
     0.535
SDU79772.1
Hypothetical protein.
  
     0.528
SDU80142.1
Protein of unknown function.
  
     0.527
SDU81207.1
Hypothetical protein.
  
     0.522
SDU78429.1
Hypothetical protein.
  
     0.508
SDU80834.1
Predicted phosphohydrolase, Cof family, HAD superfamily.
 
     0.493
SDU78948.1
Hypothetical protein.
  
     0.486
Your Current Organism:
Arcanobacterium phocae
NCBI taxonomy Id: 131112
Other names: A. phocae, CIP 105740, DSM 10002, LMG 18722, LMG:18722, strain M1590/94/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.