STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU82249.1ATP-binding cassette, subfamily C. (566 aa)    
Predicted Functional Partners:
SDU80295.1
ATP-binding cassette, subfamily C, CydC.
 
 
0.931
SDU80676.1
Peptide/nickel transport system ATP-binding protein.
 
   
0.905
SDU82689.1
Putative ABC transport system ATP-binding protein.
 
    
0.903
potA
iron(III) transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
     
0.899
SDU78118.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.888
SDU82252.1
ATP-binding cassette, subfamily C.
 
 
 
0.878
SDU80524.1
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
    
0.860
SDU80315.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
  
  
 0.723
SDU80319.1
Cytochrome d ubiquinol oxidase subunit I.
 
  
 0.705
SDU80092.1
iron(III) transport system ATP-binding protein.
 
    
0.555
Your Current Organism:
Arcanobacterium phocae
NCBI taxonomy Id: 131112
Other names: A. phocae, CIP 105740, DSM 10002, LMG 18722, LMG:18722, strain M1590/94/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.