STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EG19_04575Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)    
Predicted Functional Partners:
EG19_11705
4-hydroxybutyrate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.854
EG19_06505
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.787
EG19_03255
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.708
EG19_01070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.642
EG19_04580
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.608
EG19_08410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.591
cobB
NAD-dependent protein deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.
    
 
 0.587
EG19_06770
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.579
EG19_08540
Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.563
EG19_04570
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.536
Your Current Organism:
Thermoanaerobaculum aquaticum
NCBI taxonomy Id: 1312852
Other names: DSM 24856, JCM 18256, T. aquaticum, Thermoanaerobaculum aquaticum Losey et al. 2013, bacterium MP-01, strain MP-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.