STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N4ZU64Matrin-type domain-containing protein. (491 aa)    
Predicted Functional Partners:
A0A0N4ZKE7
Uncharacterized protein.
   
 0.999
A0A0N4ZSB0
Uncharacterized protein.
   
 0.999
A0A0N4Z3I3
Matrin-type domain-containing protein.
    
 0.998
A0A0N4Z9V8
CPSF_A domain-containing protein.
   
 0.997
A0A0N4ZFZ4
Uncharacterized protein.
   
 0.997
A0A0N4ZRW2
Uncharacterized protein.
   
 0.997
A0A0N4ZXL1
Uncharacterized protein.
    
 0.997
A0A0N4ZMY9
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.996
A0A0N4ZNL8
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.995
A0A0N4ZUE1
SF3b1 domain-containing protein.
   
 0.994
Your Current Organism:
Parastrongyloides trichosuri
NCBI taxonomy Id: 131310
Other names: P. trichosuri
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.