Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0N4ZFE1 | A0A0N4ZGB3 | Brix domain-containing protein. | RNA helicase. | 0.996 |
A0A0N4ZFE1 | A0A0N4ZK55 | Brix domain-containing protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.996 |
A0A0N4ZFE1 | A0A0N4ZNJ3 | Brix domain-containing protein. | Brix domain-containing protein. | 0.999 |
A0A0N4ZFE1 | A0A0N4ZQ43 | Brix domain-containing protein. | Uncharacterized protein. | 0.999 |
A0A0N4ZFE1 | A0A0N4ZS19 | Brix domain-containing protein. | Uncharacterized protein. | 0.998 |
A0A0N4ZFE1 | A0A0N4ZT74 | Brix domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.998 |
A0A0N4ZFE1 | A0A0N4ZUF6 | Brix domain-containing protein. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.981 |
A0A0N4ZFE1 | A0A0N4ZZ29 | Brix domain-containing protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.999 |
A0A0N4ZFE1 | A0A0N5A177 | Brix domain-containing protein. | RRM domain-containing protein. | 0.999 |
A0A0N4ZFE1 | A0A0N5A5J8 | Brix domain-containing protein. | CP-type G domain-containing protein. | 0.996 |
A0A0N4ZGB3 | A0A0N4ZFE1 | RNA helicase. | Brix domain-containing protein. | 0.996 |
A0A0N4ZGB3 | A0A0N4ZK55 | RNA helicase. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.998 |
A0A0N4ZGB3 | A0A0N4ZNJ3 | RNA helicase. | Brix domain-containing protein. | 0.996 |
A0A0N4ZGB3 | A0A0N4ZQ43 | RNA helicase. | Uncharacterized protein. | 0.995 |
A0A0N4ZGB3 | A0A0N4ZS19 | RNA helicase. | Uncharacterized protein. | 0.999 |
A0A0N4ZGB3 | A0A0N4ZT74 | RNA helicase. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
A0A0N4ZGB3 | A0A0N4ZUF6 | RNA helicase. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.891 |
A0A0N4ZGB3 | A0A0N4ZZ29 | RNA helicase. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.996 |
A0A0N4ZGB3 | A0A0N5A177 | RNA helicase. | RRM domain-containing protein. | 0.998 |
A0A0N4ZGB3 | A0A0N5A5J8 | RNA helicase. | CP-type G domain-containing protein. | 0.999 |
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