STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN00602.1Putative major facilitator superfamily transporter. (521 aa)    
Predicted Functional Partners:
BAN00603.1
Putative ArsR family transcriptional regulator.
       0.773
BAN02545.1
Putative major facilitator superfamily transporter.
  
     0.616
BAN03241.1
Putative major facilitator superfamily transporter.
  
     0.612
BAN00604.1
Hypothetical protein.
       0.554
BAN00601.1
Putative acyl-CoA dehydrogenase.
       0.507
BAN02041.1
Putative major facilitator superfamily transporter.
  
     0.507
BAN00605.1
Putative oxidoreductase.
       0.492
BAN03699.1
Hypothetical protein.
   
  
 0.456
BAN00606.1
Hypothetical protein.
 
     0.443
BAN01592.1
Putative phosphotransferase.
  
     0.432
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.