STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN00610.1Putative DeoR family transcriptional regulator. (265 aa)    
Predicted Functional Partners:
pfkB
6-phosphofructokinase PfkB.
 
  
 0.959
BAN03132.1
Putative acetyltransferase.
   
   0.874
BAN00611.1
Mannitol dehydrogenase.
  
  
 0.810
suhB
Inositol-1-monophosphatase.
     
 0.787
glpD-2
Glycerol-3-phosphate dehydrogenase.
 
  
 0.656
glpD
Glycerol-3-phosphate dehydrogenase.
 
  
 0.578
BAN00616.1
Fructokinase.
 
  
 0.559
BAN00612.1
Putative sugar ABC transporter sugar-binding protein.
  
  
 0.544
rpiB
Protein synonym:phosphoriboisomerase B.
  
  
 0.544
BAN00613.1
Putative sugar ABC transporter permease protein.
 
   
 0.482
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.