STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN00648.1Hypothetical protein. (202 aa)    
Predicted Functional Partners:
fbiA
LPPG--FO 2-phopspho-L-lactate transferase.
 
   
 0.836
BAN00652.1
Putative oxidoreductase.
     
 0.784
BAN01888.1
Putative oxidoreductase.
  
   
 0.781
BAN00985.1
Putative oxidoreductase.
  
   
 0.780
BAN02555.1
Putative oxidoreductase.
  
   
 0.780
BAN00650.1
Putative esterase.
       0.778
BAN03966.1
Putative oxidoreductase.
  
   
 0.776
BAN00649.1
Hypothetical protein.
       0.773
BAN00651.1
Hypothetical protein.
       0.773
BAN00653.1
Putative TetR family transcriptional regulator.
       0.773
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.