STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpCAlkyl hydroperoxide reductase subunit C; Protein synonym:peroxiredoxin. (189 aa)    
Predicted Functional Partners:
ahpF
Alkyl hydroperoxide reductase subunit F.
 
  
 0.982
katE
Catalase.
  
 
 0.950
trxB
Thioredoxin reductase.
  
 
 0.780
BAN02607.1
Hypothetical protein.
  
  
 0.766
BAN03273.1
Hypothetical protein.
  
 
 0.755
BAN00562.1
Hypothetical protein.
  
 0.742
BAN02939.1
Putative thiol-disulfide oxidoreductase.
  
 0.742
BAN03282.1
Hypothetical protein.
  
 0.742
BAN01067.1
Hypothetical protein.
  
 0.714
BAN03168.1
Hypothetical protein.
  
 0.714
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.