Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| nuoA | nuoB | YM304_04060 | YM304_04070 | Protein synonym:NADH dehydrogenase I subunit A. | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.999 |
| nuoA | nuoC | YM304_04060 | YM304_04080 | Protein synonym:NADH dehydrogenase I subunit A. | Protein synonym:NADH dehydrogenase I subunit C. | 0.999 |
| nuoA | nuoD | YM304_04060 | YM304_04090 | Protein synonym:NADH dehydrogenase I subunit A. | NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.999 |
| nuoA | nuoF | YM304_04060 | YM304_04110 | Protein synonym:NADH dehydrogenase I subunit A. | Protein synonym:NADH dehydrogenase I subunit F. | 0.996 |
| nuoA | nuoG | YM304_04060 | YM304_04120 | Protein synonym:NADH dehydrogenase I subunit A. | Protein synonym:NADH dehydrogenase I subunit G. | 0.998 |
| nuoA | nuoH | YM304_04060 | YM304_04130 | Protein synonym:NADH dehydrogenase I subunit A. | Protein synonym:NADH dehydrogenase I subunit H. | 0.999 |
| nuoA | nuoI | YM304_04060 | YM304_04140 | Protein synonym:NADH dehydrogenase I subunit A. | Protein synonym:NADH dehydrogenase I subunit I. | 0.998 |
| nuoA | nuoJ | YM304_04060 | YM304_04150 | Protein synonym:NADH dehydrogenase I subunit A. | Protein synonym:NADH dehydrogenase I subunit J. | 0.998 |
| nuoA | nuoK | YM304_04060 | YM304_04160 | Protein synonym:NADH dehydrogenase I subunit A. | Protein synonym:NADH dehydrogenase I subunit K. | 0.999 |
| nuoA | nuoL | YM304_04060 | YM304_04170 | Protein synonym:NADH dehydrogenase I subunit A. | Protein synonym:NADH dehydrogenase I subunit L. | 0.993 |
| nuoB | nuoA | YM304_04070 | YM304_04060 | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | Protein synonym:NADH dehydrogenase I subunit A. | 0.999 |
| nuoB | nuoC | YM304_04070 | YM304_04080 | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | Protein synonym:NADH dehydrogenase I subunit C. | 0.999 |
| nuoB | nuoD | YM304_04070 | YM304_04090 | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.999 |
| nuoB | nuoF | YM304_04070 | YM304_04110 | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | Protein synonym:NADH dehydrogenase I subunit F. | 0.999 |
| nuoB | nuoG | YM304_04070 | YM304_04120 | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | Protein synonym:NADH dehydrogenase I subunit G. | 0.999 |
| nuoB | nuoH | YM304_04070 | YM304_04130 | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | Protein synonym:NADH dehydrogenase I subunit H. | 0.999 |
| nuoB | nuoI | YM304_04070 | YM304_04140 | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | Protein synonym:NADH dehydrogenase I subunit I. | 0.999 |
| nuoB | nuoJ | YM304_04070 | YM304_04150 | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | Protein synonym:NADH dehydrogenase I subunit J. | 0.999 |
| nuoB | nuoK | YM304_04070 | YM304_04160 | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | Protein synonym:NADH dehydrogenase I subunit K. | 0.999 |
| nuoB | nuoL | YM304_04070 | YM304_04170 | NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | Protein synonym:NADH dehydrogenase I subunit L. | 0.997 |
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