STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN00862.1Hypothetical protein. (215 aa)    
Predicted Functional Partners:
BAN00861.1
Putative oxidoreductase.
  
  
 0.605
BAN00859.1
Putative AraC family transcriptional regulator.
  
 
 0.452
BAN00863.1
Hypothetical protein.
  
    0.437
BAN00864.1
Putative TetR family transcriptional regulator.
  
  
 0.426
npdA
NAD-dependent deacetylase; Protein synonym:regulatory protein SIR2 homolog.
  
    0.407
BAN00359.1
Putative GntR family transcriptional regulator.
  
    0.401
BAN02754.1
Putative GntR family transcriptional regulator.
  
    0.401
BAN04308.1
Putative GntR family transcriptional regulator.
  
    0.401
BAN04356.1
Putative GntR family transcriptional regulator.
  
    0.401
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.