Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAN00948.1 | BAN00949.1 | YM304_06340 | YM304_06350 | Putative 5,10-methylenetetrahydrofolate reductase. | Aminomethyltransferase family protein. | 0.900 |
| BAN00948.1 | BAN01572.1 | YM304_06340 | YM304_12580 | Putative 5,10-methylenetetrahydrofolate reductase. | Hypothetical protein. | 0.865 |
| BAN00948.1 | BAN02854.1 | YM304_06340 | YM304_25400 | Putative 5,10-methylenetetrahydrofolate reductase. | Hypothetical protein. | 0.758 |
| BAN00948.1 | BAN03885.1 | YM304_06340 | YM304_35710 | Putative 5,10-methylenetetrahydrofolate reductase. | Hypothetical protein. | 0.963 |
| BAN00948.1 | BAN04490.1 | YM304_06340 | YM304_41760 | Putative 5,10-methylenetetrahydrofolate reductase. | Hypothetical protein. | 0.962 |
| BAN00948.1 | folD | YM304_06340 | YM304_33540 | Putative 5,10-methylenetetrahydrofolate reductase. | Methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.920 |
| BAN00948.1 | gcvP | YM304_06340 | YM304_25760 | Putative 5,10-methylenetetrahydrofolate reductase. | Protein synonym:glycine cleavage system P-protein; protein synonym:glycine decarboxylase. | 0.764 |
| BAN00948.1 | gcvT | YM304_06340 | YM304_25740 | Putative 5,10-methylenetetrahydrofolate reductase. | Aminomethyltransferase; Protein synonym:glycine cleavage system T-protein. | 0.915 |
| BAN00948.1 | glyA | YM304_06340 | YM304_10550 | Putative 5,10-methylenetetrahydrofolate reductase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.944 |
| BAN00948.1 | metF | YM304_06340 | YM304_07250 | Putative 5,10-methylenetetrahydrofolate reductase. | 5,10-methylenetetrahydrofolate reductase. | 0.900 |
| BAN00949.1 | BAN00948.1 | YM304_06350 | YM304_06340 | Aminomethyltransferase family protein. | Putative 5,10-methylenetetrahydrofolate reductase. | 0.900 |
| BAN00949.1 | BAN04490.1 | YM304_06350 | YM304_41760 | Aminomethyltransferase family protein. | Hypothetical protein. | 0.419 |
| BAN00949.1 | folD | YM304_06350 | YM304_33540 | Aminomethyltransferase family protein. | Methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.755 |
| BAN00949.1 | gcvP | YM304_06350 | YM304_25760 | Aminomethyltransferase family protein. | Protein synonym:glycine cleavage system P-protein; protein synonym:glycine decarboxylase. | 0.998 |
| BAN00949.1 | gcvT | YM304_06350 | YM304_25740 | Aminomethyltransferase family protein. | Aminomethyltransferase; Protein synonym:glycine cleavage system T-protein. | 0.648 |
| BAN00949.1 | glyA | YM304_06350 | YM304_10550 | Aminomethyltransferase family protein. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.849 |
| BAN00949.1 | metF | YM304_06350 | YM304_07250 | Aminomethyltransferase family protein. | 5,10-methylenetetrahydrofolate reductase. | 0.577 |
| BAN01572.1 | BAN00948.1 | YM304_12580 | YM304_06340 | Hypothetical protein. | Putative 5,10-methylenetetrahydrofolate reductase. | 0.865 |
| BAN01572.1 | BAN04490.1 | YM304_12580 | YM304_41760 | Hypothetical protein. | Hypothetical protein. | 0.599 |
| BAN01572.1 | glyA | YM304_12580 | YM304_10550 | Hypothetical protein. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.533 |
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