STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureBUrease beta subunit; Protein synonym:urea amidohydrolase beta subunit. (106 aa)    
Predicted Functional Partners:
ureA
Urease gamma subunit; Protein synonym:urea amidohydrolase gamma subunit.
 0.999
ureC
Urease alpha subunit; Protein synonym:urea amidohydrolase alpha subunit.
 0.999
ureG
Urease accessory protein UreG.
 
  
 0.985
ureD
Urease accessory protein UreD.
 
 
 0.968
ureF
Putative urease accessory protein UreF.
 
 
 0.958
BAN04515.1
Putative arginase.
    
  0.903
BAN00977.1
Putative amidase.
       0.662
BAN00976.1
Hypothetical protein.
       0.465
BAN00984.1
Hypothetical protein.
       0.448
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.