STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN00986.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
BAN00574.1
Hypothetical protein.
  
 
 0.906
gspE-2
Protein synonym:general secretion pathway protein E.
  
 
 0.820
gspF
Protein synonym:general secretion pathway protein F.
  
  
 0.789
BAN00988.1
Hypothetical protein.
     
 0.644
BAN00987.1
Hypothetical protein.
       0.631
comEA
Putative competence protein ComEA.
  
  
 0.487
dprA
DNA processing protein DprA.
  
  
 0.476
BAN00451.1
Hypothetical protein.
  
  
 0.456
BAN00587.1
Peptidase A24 family protein.
  
  
 0.456
BAN00989.1
Hypothetical protein.
       0.434
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.