STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN01006.1Subtilisin-like protease. (520 aa)    
Predicted Functional Partners:
gyrB
DNA gyrase subunit B.
   
 
 0.813
gyrB-2
DNA gyrase subunit B.
   
 
 0.813
BAN01577.1
Putative serine/threonine protein kinase.
 
  
 0.739
BAN04018.1
Hypothetical protein.
 
 
 0.721
BAN01917.1
Putative two-component histidine kinase.
  
  
 0.695
BAN00526.1
Putative serine/threonine protein kinase.
 
  
 0.689
lexA
LexA repressor.
 
  
 0.656
BAN03900.1
Protein synonym:HSP70.
  
 
 0.644
dnaK
Chaperone protein DnaK; Protein synonym:HSP70; protein synonym:heat shock protein 70.
  
 
 0.644
BAN03519.1
Cation-transporting ATPase.
  
 0.633
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.