STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN01069.1Putative glycosidase. (303 aa)    
Predicted Functional Partners:
pfkB
6-phosphofructokinase PfkB.
 
  
 0.815
BAN01070.1
Hypothetical protein.
       0.697
BAN04500.1
Hypothetical protein.
    
 0.660
BAN04424.1
Beta-glucosidase.
  
     0.655
BAN01073.1
Putative sugar ABC transporter ATP-binding protein.
  
  
 0.547
BAN01074.1
Putative sugar ABC transporter permease protein.
  
  
 0.532
BAN01071.1
Putative sugar ABC transporter permease protein.
     
 0.520
BAN01072.1
Putative sugar ABC transporter sugar-binding protein.
  
  
 0.515
BAN03701.1
Alpha-galactosidase.
 
   
 0.512
rpiB
Protein synonym:phosphoriboisomerase B.
  
  
 0.501
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.