Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAN00344.1 | BAN00488.1 | YM304_00300 | YM304_01740 | Putative AraC family transcriptional regulator. | Putative AraC family transcriptional regulator. | 0.690 |
BAN00344.1 | BAN01127.1 | YM304_00300 | YM304_08130 | Putative AraC family transcriptional regulator. | ThiJ/PfpI family protein. | 0.619 |
BAN00344.1 | lexA | YM304_00300 | YM304_26970 | Putative AraC family transcriptional regulator. | LexA repressor. | 0.426 |
BAN00488.1 | BAN00344.1 | YM304_01740 | YM304_00300 | Putative AraC family transcriptional regulator. | Putative AraC family transcriptional regulator. | 0.690 |
BAN00488.1 | BAN01127.1 | YM304_01740 | YM304_08130 | Putative AraC family transcriptional regulator. | ThiJ/PfpI family protein. | 0.441 |
BAN00488.1 | BAN01291.1 | YM304_01740 | YM304_09770 | Putative AraC family transcriptional regulator. | Putative AraC family transcriptional regulator. | 0.594 |
BAN01125.1 | BAN01126.1 | YM304_08110 | YM304_08120 | Hypothetical protein. | Hypothetical protein. | 0.514 |
BAN01125.1 | BAN01127.1 | YM304_08110 | YM304_08130 | Hypothetical protein. | ThiJ/PfpI family protein. | 0.463 |
BAN01126.1 | BAN01125.1 | YM304_08120 | YM304_08110 | Hypothetical protein. | Hypothetical protein. | 0.514 |
BAN01126.1 | BAN01127.1 | YM304_08120 | YM304_08130 | Hypothetical protein. | ThiJ/PfpI family protein. | 0.618 |
BAN01127.1 | BAN00344.1 | YM304_08130 | YM304_00300 | ThiJ/PfpI family protein. | Putative AraC family transcriptional regulator. | 0.619 |
BAN01127.1 | BAN00488.1 | YM304_08130 | YM304_01740 | ThiJ/PfpI family protein. | Putative AraC family transcriptional regulator. | 0.441 |
BAN01127.1 | BAN01125.1 | YM304_08130 | YM304_08110 | ThiJ/PfpI family protein. | Hypothetical protein. | 0.463 |
BAN01127.1 | BAN01126.1 | YM304_08130 | YM304_08120 | ThiJ/PfpI family protein. | Hypothetical protein. | 0.618 |
BAN01127.1 | BAN01291.1 | YM304_08130 | YM304_09770 | ThiJ/PfpI family protein. | Putative AraC family transcriptional regulator. | 0.758 |
BAN01127.1 | BAN03742.1 | YM304_08130 | YM304_34280 | ThiJ/PfpI family protein. | Hypothetical protein. | 0.486 |
BAN01127.1 | lexA | YM304_08130 | YM304_26970 | ThiJ/PfpI family protein. | LexA repressor. | 0.414 |
BAN01291.1 | BAN00488.1 | YM304_09770 | YM304_01740 | Putative AraC family transcriptional regulator. | Putative AraC family transcriptional regulator. | 0.594 |
BAN01291.1 | BAN01127.1 | YM304_09770 | YM304_08130 | Putative AraC family transcriptional regulator. | ThiJ/PfpI family protein. | 0.758 |
BAN01291.1 | lexA | YM304_09770 | YM304_26970 | Putative AraC family transcriptional regulator. | LexA repressor. | 0.414 |
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