STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN01213.1Maf-like protein. (192 aa)    
Predicted Functional Partners:
dusB
tRNA-dihydrouridine synthase.
 
     0.878
BAN02636.1
Putative RNA methyltransferase.
     0.830
BAN01214.1
Hypothetical protein.
  
    0.772
BAN02266.1
Hypothetical protein.
    0.753
BAN01211.1
Hypothetical protein.
     
 0.675
rimI
Ribosomal-protein-alanine acetyltransferase.
   
   0.637
alr
Alanine racemase.
     
 0.588
BAN01208.1
Peptidase M22 family protein.
       0.583
gcp
Putative O-sialoglycoprotein endopeptidase.
       0.580
BAN01205.1
Hypothetical protein.
       0.577
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.