STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN01739.1Putative hydratase. (174 aa)    
Predicted Functional Partners:
BAN01741.1
Putative malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.887
BAN01742.1
Putative acyl-CoA lyase.
 
  
 0.791
meaA
Putative methylmalonyl-CoA mutase; Protein synonym:coenzyme B12-dependent mutase.
 
  
 0.775
mutY
A/G-specific adenine glycosylase.
  
    0.767
BAN04026.1
crotonyl-CoA reductase.
 
 
 0.759
katE
Catalase.
   
 0.716
BAN01728.1
Putative acyl-CoA dehydrogenase.
 
 0.691
BAN01738.1
Hypothetical protein.
 
     0.683
BAN04198.1
Putative fatty acid oxidation complex alpha subunit; Multifunctional protein.
  
 0.625
fadE
acyl-CoA dehydrogenase.
 
 0.572
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.