STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN01856.1Hypothetical protein. (164 aa)    
Predicted Functional Partners:
rsmA
Ribosomal RNA small subunit methyltransferase A; Protein synonym:16S rRNA dimethyladenosine transferase; protein synonym:S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase.
  
  
 0.805
BAN01858.1
Putative oxidoreductase.
   
   0.594
nudC
NADH pyrophosphatase.
     
 0.580
BAN01855.1
Putative acetyl-CoA acyltransferase; Protein synonym:3-ketoacyl-CoA thiolase.
       0.510
BAN02540.1
Hypothetical protein.
  
   
 0.495
mshD
Acetyltransferase MshD; Protein synonym:acetyl-CoA--1D-myo-inosityl 2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside acetyltransferase; protein synonym:mycothiol synthase.
 
     0.471
BAN03772.1
Hypothetical protein.
 
      0.450
crtE
Geranylgeranyl pyrophosphate synthase.
  
     0.445
BAN02561.1
Putative WhiB family transcriptional regulator.
  
   
 0.436
BAN00800.1
Hypothetical protein.
 
     0.430
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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