Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAN00800.1 | BAN01856.1 | YM304_04860 | YM304_15420 | Hypothetical protein. | Hypothetical protein. | 0.430 |
BAN00800.1 | BAN02561.1 | YM304_04860 | YM304_22470 | Hypothetical protein. | Putative WhiB family transcriptional regulator. | 0.407 |
BAN01855.1 | BAN01856.1 | YM304_15410 | YM304_15420 | Putative acetyl-CoA acyltransferase; Protein synonym:3-ketoacyl-CoA thiolase. | Hypothetical protein. | 0.510 |
BAN01855.1 | BAN01858.1 | YM304_15410 | YM304_15440 | Putative acetyl-CoA acyltransferase; Protein synonym:3-ketoacyl-CoA thiolase. | Putative oxidoreductase. | 0.476 |
BAN01856.1 | BAN00800.1 | YM304_15420 | YM304_04860 | Hypothetical protein. | Hypothetical protein. | 0.430 |
BAN01856.1 | BAN01855.1 | YM304_15420 | YM304_15410 | Hypothetical protein. | Putative acetyl-CoA acyltransferase; Protein synonym:3-ketoacyl-CoA thiolase. | 0.510 |
BAN01856.1 | BAN01858.1 | YM304_15420 | YM304_15440 | Hypothetical protein. | Putative oxidoreductase. | 0.594 |
BAN01856.1 | BAN02540.1 | YM304_15420 | YM304_22260 | Hypothetical protein. | Hypothetical protein. | 0.495 |
BAN01856.1 | BAN02561.1 | YM304_15420 | YM304_22470 | Hypothetical protein. | Putative WhiB family transcriptional regulator. | 0.436 |
BAN01856.1 | BAN03772.1 | YM304_15420 | YM304_34580 | Hypothetical protein. | Hypothetical protein. | 0.450 |
BAN01856.1 | crtE | YM304_15420 | YM304_37400 | Hypothetical protein. | Geranylgeranyl pyrophosphate synthase. | 0.445 |
BAN01856.1 | mshD | YM304_15420 | YM304_22590 | Hypothetical protein. | Acetyltransferase MshD; Protein synonym:acetyl-CoA--1D-myo-inosityl 2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside acetyltransferase; protein synonym:mycothiol synthase. | 0.471 |
BAN01856.1 | nudC | YM304_15420 | YM304_15430 | Hypothetical protein. | NADH pyrophosphatase. | 0.580 |
BAN01856.1 | rsmA | YM304_15420 | YM304_33050 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase A; Protein synonym:16S rRNA dimethyladenosine transferase; protein synonym:S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase. | 0.805 |
BAN01858.1 | BAN01855.1 | YM304_15440 | YM304_15410 | Putative oxidoreductase. | Putative acetyl-CoA acyltransferase; Protein synonym:3-ketoacyl-CoA thiolase. | 0.476 |
BAN01858.1 | BAN01856.1 | YM304_15440 | YM304_15420 | Putative oxidoreductase. | Hypothetical protein. | 0.594 |
BAN01858.1 | nudC | YM304_15440 | YM304_15430 | Putative oxidoreductase. | NADH pyrophosphatase. | 0.773 |
BAN02540.1 | BAN01856.1 | YM304_22260 | YM304_15420 | Hypothetical protein. | Hypothetical protein. | 0.495 |
BAN02540.1 | crtE | YM304_22260 | YM304_37400 | Hypothetical protein. | Geranylgeranyl pyrophosphate synthase. | 0.535 |
BAN02561.1 | BAN00800.1 | YM304_22470 | YM304_04860 | Putative WhiB family transcriptional regulator. | Hypothetical protein. | 0.407 |
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