STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN01876.1Hypothetical protein. (443 aa)    
Predicted Functional Partners:
BAN01877.1
Putative nickel transporter.
 
     0.957
BAN01875.1
Hypothetical protein.
 
    0.894
ccmF
Cytochrome c-type biogenesis protein CcmF.
  
 
 0.733
BAN02392.1
Hypothetical protein.
  
     0.678
ccmH
Cytochrome c biogenesis protein CcmH.
  
  
 0.566
BAN04462.1
Hypothetical protein.
 
   
 0.558
BAN02449.1
Hypothetical protein.
  
     0.547
BAN03760.1
Putative RNA polymerase ECF subfamily sigma factor.
 
     0.530
BAN03497.1
Hypothetical protein.
 
     0.512
BAN04464.1
Hypothetical protein.
 
   
 0.494
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.