STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN01927.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
BAN01926.1
Hypothetical protein.
  
 
 0.965
BAN02672.1
Hypothetical protein.
  
 
 0.852
BAN01925.1
Hypothetical protein.
       0.486
BAN01929.1
Putative Xre family DNA-binding protein.
  
    0.457
npdA
NAD-dependent deacetylase; Protein synonym:regulatory protein SIR2 homolog.
   
    0.432
BAN03742.1
Hypothetical protein.
   
    0.416
BAN01928.1
Hypothetical protein.
       0.411
BAN01226.1
Hypothetical protein.
   
    0.408
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.