STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN01967.1Hypothetical protein. (707 aa)    
Predicted Functional Partners:
BAN01966.1
CinA-like protein.
     
 0.621
rimO
Ribosomal protein S12 methylthiotransferase RimO.
       0.610
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Protein synonym:phosphatidylglycerophosphate synthase.
       0.610
BAN01963.1
Putative DeoR family transcriptional regulator.
       0.602
BAN01968.1
Putative CarD family transcriptional regulator.
       0.455
BAN01962.1
Hypothetical protein.
       0.416
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.