STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN02171.1Putative CPA1 family transporter. (441 aa)    
Predicted Functional Partners:
nth
Putative endonuclease III; Protein synonym:DNA-(apurinic or apyrimidinic site) lyase.
       0.737
BAN03964.1
Putative sodium/proton antiporter.
  
     0.514
BAN02169.1
Hypothetical protein.
       0.500
BAN04076.1
Hypothetical protein.
 
     0.461
BAN02172.1
Putative ribosomal RNA methyltransferase.
       0.450
glpK
Glycerol kinase.
   
 0.420
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.420
glpK-3
Glycerol kinase.
   
 0.420
BAN03519.1
Cation-transporting ATPase.
   
 
 0.401
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.