STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaEDNA polymerase III alpha subunit. (1194 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III beta subunit.
  
 
 0.992
holA
DNA polymerase III delta subunit.
  
 0.990
holB
Putative DNA polymerase III delta' subunit.
 
 0.989
dnaX
DNA polymerase III gamma/tau subunit.
 
 0.988
dnaQ
Putative DNA polymerase III epsilon subunit.
    
 0.948
BAN01800.1
Hypothetical protein.
    
 0.911
ssb
Single-stranded DNA-binding protein; Protein synonym:helix-destabilizing protein.
 
 
 
 0.896
BAN02797.1
Hypothetical protein.
   
 
 0.866
dnaG
DNA primase.
 
  
 0.741
secA
Preprotein translocase SecA subunit.
 
   
 0.720
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.