STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN02443.1Putative phosphatase. (229 aa)    
Predicted Functional Partners:
BAN03378.1
Aldehyde dehydrogenase.
  
 
 0.906
BAN03473.1
Aldehyde dehydrogenase.
  
 
 0.906
BAN04348.1
Aldehyde dehydrogenase.
  
 
 0.906
fabZ
Beta-hydroxyacyl-[acyl-carrier-protein] dehydratase.
       0.779
BAN02441.1
Putative acyltransferase.
   
 
 0.616
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Protein synonym:5-enolpyruvylshikimate-3-phosphate synthase.
      0.604
BAN01133.1
Peptidase S01 family protein.
 
 
  0.486
BAN01653.1
Peptidase S01 family protein.
  
 
  0.409
BAN03446.1
Peptidase S01 family protein.
  
 
  0.409
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.